Package: file2meco 0.9.1
file2meco: Transform Files to 'microtable' Object with 'microeco' Package
Transform output files of some tools to the 'microtable' object of 'microtable' class in 'microeco' package. The 'microtable' class is the basic class in 'microeco' package and is necessary for the downstream microbial community data analysis.
Authors:
file2meco_0.9.1.tar.gz
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file2meco.pdf |file2meco.html✨
file2meco/json (API)
# Install 'file2meco' in R: |
install.packages('file2meco', repos = c('https://chiliubio.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/chiliubio/file2meco/issues
- CHOCOPhlAn_taxonomy - The CHOCOPhlAn_taxonomy data
- MetaCyc_pathway_map - The MetaCyc_pathway_map data
- ncyc_map - The ncyc_map data
- pcyc_map - The pcyc_map data
Last updated 6 days agofrom:430001f244. Checks:OK: 1 NOTE: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 31 2024 |
R-4.5-win | NOTE | Oct 31 2024 |
R-4.5-linux | NOTE | Oct 31 2024 |
R-4.4-win | NOTE | Oct 31 2024 |
R-4.4-mac | NOTE | Oct 31 2024 |
R-4.3-win | NOTE | Oct 31 2024 |
R-4.3-mac | NOTE | Oct 31 2024 |
Exports:humann2mecomeco2phyloseqmeco2tsemetacyc_pathway_websitempa2meconcyc2mecophyloseq2mecoqiime1mecoqiime2mecotse2mecovs2meco
Dependencies:apecliclustercolorspacecpp11data.tabledigestdplyrfansifarvergenericsggplot2gluegtableigraphisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmicroecomunsellnlmepermutepillarpkgconfigplyrpurrrR6RColorBrewerRcppreshape2rhdf5rhdf5filtersRhdf5librlangscalesstringistringrtibbletidyrtidyselectutf8vctrsveganviridisLitewithryaml