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- file2meco::CHOCOPhlAn_taxonomyThe CHOCOPhlAn_taxonomy data
- file2meco::MetaCyc_pathway_mapThe MetaCyc_pathway_map data
- file2meco::ncyc_mapThe ncyc_map data
- file2meco::pcyc_mapThe pcyc_map data
- meconetcomp::soil_ampThe soil_amp data
- meconetcomp::soil_amp_networkThe soil_amp_network data
- meconetcomp::soil_measure_diversityThe soil_measure_diversity data
- meconetcomp::stool_metThe stool_met data
- mecoturn::wheat_16SThe example dataset in the mecoturn package
- microeco::datasetThe dataset structured with microtable class for the demonstration of examples
- microeco::env_data_16SThe environmental factors for the 16S example data
- microeco::fungi_func_FungalTraitsThe FungalTraits database for fungi trait prediction
- microeco::fungi_func_FUNGuildThe FUNGuild database for fungi trait prediction
- microeco::otu_table_16SThe OTU table of the 16S example data
- microeco::otu_table_ITSThe OTU table of the ITS example data
- microeco::phylo_tree_16SThe phylogenetic tree of 16S example data
- microeco::prok_func_FAPROTAXCustomized FAPROTAX trait database
- microeco::prok_func_NJC19_listThe NJC19 database
- microeco::sample_info_16SThe sample information of 16S example data
- microeco::sample_info_ITSThe sample information of ITS example data
- microeco::soil_metabMicrotable object of non-targeted metabolome data from bulk soil and maize rhizosphere soil in an agricultural field experiment with crop rotation and fertilization treatments (DOI: 10.1007/s11104-024-06847-9).
- microeco::soil_microbMicrotable object of prokaryotic sequencing data from soil and maize in an agricultural field experiment with crop rotation and fertilization treatments (DOI: 10.1007/s11104-024-06847-9).
- microeco::Tax4Fun2_KEGGThe KEGG data files used in the trans_func class
- microeco::taxonomy_table_16SThe taxonomic information of 16S example data
- microeco::taxonomy_table_ITSThe taxonomic information of ITS example data
