Chi Liu, Xiangzhen Li, Felipe R. P. Mansoldo, Tong Chen, Fanzheng Meng, Ruixiang Tang, Siyu Zhou, Qinghua Yang, Ruixin Shao, Minjie Yao. microeco 2: A comprehensive R package for downstream analysis of microbiome omics data. iMeta, 2026, 5: e70132. https://doi.org/10.1002/imt2.70132

Chi Liu, Felipe R. P. Mansoldo, Hankang Li, Alane Beatriz Vermelho, Raymond Jianxiong Zeng, Xiangzhen Li, Minjie Yao. A workflow for statistical analysis and visualization of microbiome omics data using the R microeco package. Nature Protocols, 2026, 21: 1300–1324. https://doi.org/10.1038/s41596-025-01239-4

Corresponding BibTeX entries:

  @Article{,
    title = {microeco 2: A comprehensive R package for downstream
      analysis of microbiome omics data},
    author = {Chi Liu and Xiangzhen Li and Felipe R. P. Mansoldo and
      Tong Chen and Fanzheng Meng and Ruixiang Tang and Siyu Zhou and
      Qinghua Yang and Ruixin Shao and Minjie Yao},
    year = {2026},
    journal = {iMeta},
    volume = {5},
    pages = {e70132},
    doi = {10.1002/imt2.70132},
    url = {https://doi.org/10.1002/imt2.70132},
  }

  @Article{,
    title = {A workflow for statistical analysis and visualization of
      microbiome omics data using the R microeco package},
    author = {Chi Liu and Felipe R. P. Mansoldo and Hankang Li and
      Alane Beatriz Vermelho and Raymond Jianxiong Zeng and Xiangzhen
      Li and Minjie Yao},
    year = {2026},
    journal = {Nature Protocols},
    volume = {21},
    number = {4},
    pages = {1300-1324},
    doi = {10.1038/s41596-025-01239-4},
    url = {https://doi.org/10.1038/s41596-025-01239-4},
  }